The mission of the Bioinformatics group is to provide a collaborative learning environment with main focus on life sciences.
The main objectives of Bioinformatics group are:
Bioinformatics group is mainly focused on the following studies
Sequence Data analysis:
DNA sequence quality analysis, Quality trimming, Clustering, Alignment, variant analysis, phylogenetic analysis, and multiple sequence analysis.
Immunoinformatics:
Antigen prediction, antigenic peptide prediction, B-cell epitope prediction, T-Cell epitope prediction, proteasome cleavage prediction, codon optimization, insilico 3D structure development from peptide sequence, molecular docking of antigen and antibody.
Bioinformatics for epigenetics studies:
CGIs prediction, Promoter prediction, TF binding side prediction, exons and introns finding, UTR prediction, ORF and CDS finding, in-silico bisulfite conversion, Bisulphite specific primer design, Data analysis.
Structural Bioinformatics:
Protein structure prediction, 3D structure analysis of protein, Molecular docking.
Primer and PCR design by in-silico:
Primer design for end point PCR,cloning primer design, primer for site-specific mutagenesis, qPCR primer design, PCR facilitated deletion of Ring domain from human TRAF6, PCR facilitated generation of the point mutation, PCR-facilitated addition of HA tag at N-term of TRAF6.
Group member:
Muhammad Mohsin Arshad